USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: S10AG_HUMAN USC-OGP 2-DE database:  S10AG_HUMAN S10AG_HUMAN General information about the entry View entry in simple text format Entry name S10AG_HUMAN Primary accession number Q96FQ6 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Protein S100-A16; AltName: Full=Aging-associated gene 13 protein; AltName: Full=Protein S100-F; AltName: Full=S100 calcium-binding protein A16;. Gene name Name=S100A16 Synonyms=S100F ORFNames=AAG13 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1354: pI=6.35; Mw=13274 Cross-references UniProtKB/Swiss-Prot Q96FQ6; S10AG_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name S10AG_HUMAN Primary accession number Q96FQ6 Secondary accession number(s) A8K439 D3DV52 Q5RHS6 Sequence was last modified on  December 1, 2001 (version 1) Annotations were last modified on  March 15, 2017 (version 133) Name and origin of the protein Description RecName: Full=Protein S100-A16; AltName: Full=Aging-associated gene 13 protein; AltName: Full=Protein S100-F; AltName: Full=S100 calcium-binding protein A16; Gene name Name=S100A16 Synonyms=S100F ORFNames=AAG13 Encoded on Name=S100A16; Synonyms=S100F; ORFNames=AAG13 Keywords 3D-structure; Calcium; Complete proteome; Cytoplasm; Metal-binding; Nucleus; Reference proteome; Repeat. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AJ585980; CAE51865.1; -; Genomic_DNA EMBL AY221961; AAP46152.1; -; mRNA EMBL AY762098; AAW88319.1; -; mRNA EMBL AK290804; BAF83493.1; -; mRNA EMBL BX470102; CAI14758.1; -; Genomic_DNA EMBL CH471121; EAW53303.1; -; Genomic_DNA EMBL CH471121; EAW53304.1; -; Genomic_DNA EMBL BC010541; AAH10541.1; -; mRNA EMBL BC019099; AAH19099.1; -; mRNA EMBL BC095462; AAH95462.1; -; mRNA CCDS CCDS1045.1; -; . RefSeq NP_001303936.1; NM_001317007.1; . RefSeq NP_001303937.1; NM_001317008.1; . RefSeq NP_525127.1; NM_080388.2; . UniGene Hs.515714; -; . PDB 2L50; NMR; -; A/B=2-103 PDB 2L51; NMR; -; A/B=2-103 PDB 3NXA; X-ray; 2.10 A; A/B/C/D=3-102 PDBsum 2L50; -; . PDBsum 2L51; -; . PDBsum 3NXA; -; . ProteinModelPortal Q96FQ6; -; . SMR Q96FQ6; -; . BioGrid 126627; 35; . IntAct Q96FQ6; 8; . MINT MINT-1457417; -; . STRING 9606.ENSP00000357692; -; . TCDB 8.A.81.1.3; the s100 calcium-binding protein (s100) family; . iPTMnet Q96FQ6; -; . PhosphoSitePlus Q96FQ6; -; . SwissPalm Q96FQ6; -; . BioMuta S100A16; -; . DMDM 20178113; -; . SWISS-2DPAGE Q96FQ6; -; . EPD Q96FQ6; -; . MaxQB Q96FQ6; -; . PaxDb Q96FQ6; -; . PeptideAtlas Q96FQ6; -; . PRIDE Q96FQ6; -; . TopDownProteomics Q96FQ6; -; . DNASU 140576; -; . Ensembl ENST00000368703; ENSP00000357692; ENSG00000188643; . Ensembl ENST00000368704; ENSP00000357693; ENSG00000188643; . Ensembl ENST00000368705; ENSP00000357694; ENSG00000188643; . Ensembl ENST00000368706; ENSP00000357695; ENSG00000188643; . GeneID 140576; -; . KEGG hsa:140576; -; . UCSC uc001fcc.5; human; . CTD 140576; -; . DisGeNET 140576; -; . GeneCards S100A16; -; . HGNC HGNC:20441; S100A16; . HPA HPA045841; -; . neXtProt NX_Q96FQ6; -; . OpenTargets ENSG00000188643; -; . PharmGKB PA134931606; -; . eggNOG ENOG410IXNY; Eukaryota; . eggNOG ENOG41115R5; LUCA; . GeneTree ENSGT00390000000920; -; . HOGENOM HOG000013071; -; . HOVERGEN HBG001479; -; . InParanoid Q96FQ6; -; . OMA MADCYTE; -; . OrthoDB EOG091G0YU7; -; . PhylomeDB Q96FQ6; -; . TreeFam TF332727; -; . ChiTaRS S100A16; human; . EvolutionaryTrace Q96FQ6; -; . GeneWiki S100A16; -; . GenomeRNAi 140576; -; . PRO PR:Q96FQ6; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000188643; -; . CleanEx HS_S100A16; -; . Genevisible Q96FQ6; HS; . GO GO:0005829; C:cytosol; IDA:UniProtKB; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005730; C:nucleolus; IDA:UniProtKB; . GO GO:0005886; C:plasma membrane; IDA:HPA; . GO GO:0005509; F:calcium ion binding; IDA:UniProtKB; . GO GO:0042803; F:protein homodimerization activity; IPI:UniProtKB; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0051592; P:response to calcium ion; IEA:Ensembl; . Gene3D 1.10.238.10; -; 1; . InterPro IPR011992; EF-hand-dom_pair; . InterPro IPR018247; EF_Hand_1_Ca_BS; . InterPro IPR002048; EF_hand_dom; . InterPro IPR001751; S100/CaBP-9k_CS; . InterPro IPR013787; S100_Ca-bd_sub; . Pfam PF13202; EF-hand_5; 1; . Pfam PF01023; S_100; 1; . SMART SM01394; S_100; 1; . SUPFAM SSF47473; SSF47473; 1; . PROSITE PS00018; EF_HAND_1; 1; . PROSITE PS50222; EF_HAND_2; 1; . PROSITE PS00303; S100_CABP; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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